{"id":"E-GEAD-311","research":"hum0122","url":"https://humandbs.dbcls.jp/dataset/E-GEAD-311","datePublished":"2019-11-14","dateModified":"2019-11-14","values":[{"key":"access-criteria","label":{"ja":"アクセス制限","en":"Access criteria"},"type":"vocabulary","terms":[{"code":"unrestricted-access","label":{"ja":"非制限公開","en":"Unrestricted-access"}}]},{"key":"type-of-data","label":{"ja":"データの種類","en":"Type of data"},"type":"text","text":{"ja":"SNPアレイ","en":"SNP array"}}],"experiments":[{"label":"Genotyping by array (SNVs/CNVs)","values":[{"key":"materials-and-participants","label":{"ja":"材料と対象者","en":"Materials and participants"},"type":"text","text":{"ja":"ヒト臍帯血由来単核細胞細胞（タカラバイオD10118）：1検体（CB_1）\n- CB_1から誘導したiPS細胞：4検体\n成人皮膚線維芽細胞（クラボウKF4109）：1検体（adult human dermal fibroblast [HDFa]）\n- HDFaから誘導したiPS細胞：2検体","en":"Mononuclear Cells from Cord Blood (Takara D10118): 1 sample (CB_1)\n- iPS cells derived from CB_1: 4 samples\nHuman Dermal Fibroblast (KURABO KF4109): 1 sample (HDFa)\n- iPS cells derived from HDFa: 2 samples"}},{"key":"subject-count","label":{"ja":"対象者数","en":"Subject count"},"type":"number","numbers":[{"value":8,"unit":null,"high":null}]},{"key":"subject-count-type","label":{"ja":"対象者数の数え方","en":"Counted as"},"type":"vocabulary","terms":[{"code":"sample","label":{"ja":"検体数","en":"Sample"}}]},{"key":"sample-description","label":{"ja":"試料説明","en":"Sample description"},"type":"text","text":{"ja":"樹立したiPS細胞、および樹立に用いた初代細胞それぞれから抽出したDNA","en":"DNAs extracted from iPS cells and their parental cells"}},{"key":"tissue","label":{"ja":"組織","en":"Tissue"},"type":"vocabulary","terms":[{"code":"cord-blood","label":{"ja":"臍帯血","en":"Cord blood"}},{"code":"cord-blood-mononuclear-cell","label":{"en":"Cord blood mononuclear cell"}},{"code":"dermal-fibroblast","label":{"en":"Dermal fibroblast"}},{"code":"ipsc","label":{"ja":"iPS 細胞","en":"iPSC"}}]},{"key":"is-tumor","label":{"ja":"腫瘍 / 非腫瘍","en":"Tumor / normal"},"type":"vocabulary","terms":[{"code":"normal","label":{"ja":"非腫瘍","en":"Normal"}}]},{"key":"cell-line","label":{"ja":"細胞株","en":"Cell line"},"type":"vocabulary","terms":[{"code":"cord-blood-mononuclear-cell-takara-d10118","label":{"en":"Cord blood mononuclear cell (TaKaRa D10118)"}},{"code":"hdfa-kurabo-kf4109","label":{"en":"HDFa (KURABO KF4109)"}},{"code":"ipsc","label":{"en":"iPSC"}}]},{"key":"sample-provider","label":{"ja":"試料の入手元","en":"Sample provider"},"type":"text","text":{"ja":"タカラバイオ（D10118）：\nhttp://catalog.takara-bio.co.jp/product/basic_info.php?unitid=U100007076\nクラボウ（KF4109）：\nhttps://www.kurabo.co.jp/bio/product/products.php?M=L&A=C&PPID=118","en":"TaKaRa Bio (D10118):\nhttp://catalog.takara-bio.co.jp/product/basic_info.php?unitid=U100007076\nKURABO (KF4109):\nhttps://www.kurabo.co.jp/bio/product/products.php?M=L&A=C&PPID=118"}},{"key":"experimental-method","label":{"ja":"実験方法","en":"Experimental method"},"type":"vocabulary","terms":[{"code":"genotyping-by-array","label":{"en":"Genotyping by array"}}]},{"key":"targets","label":{"ja":"測定対象","en":"Target"},"type":"text","text":{"ja":null,"en":null}},{"key":"reagents","label":{"ja":"試薬キット","en":"Reagent kit"},"type":"vocabulary","terms":[{"code":"humanomni2-5-beadchip-kit","label":{"en":"HumanOmni2.5 BeadChip Kit"}}]},{"key":"platform","label":{"ja":"プラットフォーム","en":"Platform"},"type":"vocabulary","terms":[{"code":"illumina-humanomni2-5","label":{"en":"Illumina HumanOmni2.5"}}]},{"key":"analysis-methods","label":{"ja":"解析方法","en":"Analysis method"},"type":"text","text":{"ja":"GenomeStudio（Illumina）","en":"GenomeStudio (Illumina)"}},{"key":"variant-number","label":{"ja":"バリアント数","en":"Variant count"},"type":"number","numbers":[{"value":2500000,"unit":null,"high":null,"suffix":{"ja":" CNVs (約)","en":" CNVs (Approx.)"}}]},{"key":"policies","label":{"ja":"利用ポリシー","en":"Data use policy"},"type":"vocabulary","terms":[{"code":"nbdc-data-sharing-policy-jgap000001","label":{"ja":"NBDC データ共有ポリシー (JGAP000001)","en":"NBDC data sharing policy (JGAP000001)"}}]}]}],"dataVolume":493817047,"fileFormats":[{"code":"tar","label":{"en":"TAR"}}]}